Another article from Discover magazine. I added mine to the end.
http://discovermagazine.com/2007/aug/unsolved-brain-mysteries/article_view?b_start:int=2&-C=
1. How is information coded in neural activity?
2. How are memories stored and retrieved?
3. What does the baseline activity in the brain represent?
4. How do brains simulate the future?
5. What are emotions?
6. What is intelligence
7. How is time represented in the brain?
8. Why do brains sleep and dream?
9. How do the specialized systems of the brain integrate with one another?
10. What is consciousness?
11. How do neurons request nearby neurons to help them with a task?
12. Why would a neuron give up its known task to take on something new?
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