Can EMR text mining improve atrial fibrillation prediction after ischemic stroke?

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Can EMR text mining improve atrial fibrillation prediction after ischemic stroke?

BACKGROUND

Stroke remains one of the leading causes of mortality and long-term disability worldwide. Atrial fibrillation (AF) is a major and often underdiagnosed risk factor for ischemic stroke as it is frequently asymptomatic and may remain undetected until a catastrophic cerebrovascular event occurs. The lack of timely identification and preventive treatment for AF substantially increases stroke risk. Although previous studies have proposed various predictive models for AF detection, many rely primarily on structured clinical variables and are developed using data from a single institution, which limits their generalizability and real-world applicability across different health care settings.

OBJECTIVE

The objective of this study was to develop a robust and generalizable AF risk prediction model for patients with stroke using electronic medical records. By integrating structured clinical variables with features derived from unstructured clinical text, this study aimed to construct a more comprehensive representation of patient health status. Furthermore, this study emphasized systematic internal and external validation, along with calibration assessment, to evaluate model stability and generalizability across multiple hospital datasets, thereby supporting its potential use in routine clinical practice.

METHODS

This study analyzed datasets from 2 hospitals in Taiwan: Landseed International Hospital (LIH), with 3988 patients, and Chia-Yi Christian Hospital (CYCH), with 5821 patients. We applied 5 feature engineering techniques to extract features from unstructured electronic medical record data, addressed data imbalance using 6 distinct resampling methods, and used 9 classification algorithms to compare model performance across both internal and external validation sets. This study identified the top 20 most important features from the best-performing models for both the LIH and CYCH datasets.

RESULTS

The optimal predictive model for LIH was based solely on structured variables, whereas the model for CYCH achieved superior results by integrating structured variables with text-derived variables obtained from unstructured clinical notes using term frequency-inverse document frequency. Notably, feature importance analysis consistently identified the ratio of E- to A-wave velocities, left atrial size, and age as the top 3 predictive factors across both datasets, underscoring their critical role in AF risk assessment among patients with stroke.

CONCLUSIONS

This study demonstrated the development of predictive models for AF in patients with ischemic stroke. Notably, the integration of structured variables with variables derived from unstructured clinical text improved predictive performance in selected model configurations. Rigorous internal and external validation processes confirmed the superior performance of ensemble learning-based machine learning models compared with alternative algorithms, underscoring the potential of this approach for AF risk prediction.

REFERENCES

1. Enhanced Prediction of Atrial Fibrillation in Patients With Ischemic Stroke Through Electronic Medical Records and Text Mining: Algorithm Development and Validation.

   Chen YW, Sung SF, Hu YH, Yang YH.

   JMIR Med Inform. 2026 Mar 10; 14 e78117